SAMEA3214812
EXTERNALSample
- Accession
SAMEA3214812- Alias
- STM3
- Sex
- Female
- Center
- CENTRE FOR GEOGENETICS
- Description
- STM3
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
L2a1f
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L2chrM:12194G>A, chrM:13013G>A, chrM:15813G>A, chrM:16138T>C, chrM:16187T>C, chrM:1840T>C, chrM:7629G>A, chrM:8644A>G, chrM:9538T>C
-
L2a'b'c'dchrM:11367T>C
-
L2achrM:6598T>C
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L2a1'2'3'4chrM:11337G>A, chrM:13226A>G, chrM:13989A>G, chrM:15717C>T, chrM:6697C>T, chrM:7194A>G
-
L2a1chrM:15207T>C, chrM:16174T>C
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L2a1fchrM:5004A>G
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina HiSeq 2000 ·
Layout: SINGLE ·
Reads: 60355273 ·
Read length: — ·
Date: 2015-02-17
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ERR738562.fastq.gz | FASTQ | 4.4 GB | — | — | 0f6d7bcf4a2eb1369cd8db70bc7cd5f1 | Download |
Instrument: Illumina HiSeq 2000 ·
Layout: SINGLE ·
Reads: 14839923 ·
Read length: — ·
Date: 2015-02-17
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ERR738563.fastq.gz | FASTQ | 1.2 GB | — | — | 9041df6561762ca0f9c41238a1bc1a57 | Download |
Instrument: Illumina HiSeq 2000 ·
Layout: SINGLE ·
Reads: 1203557 ·
Read length: — ·
Date: 2015-02-17
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ERR738564.fastq.gz | FASTQ | 96.2 MB | — | — | 9d463ad5464335973920b387c0a260c1 | Download |
Instrument: Illumina HiSeq 2000 ·
Layout: SINGLE ·
Reads: 14005715 ·
Read length: — ·
Date: 2015-02-17
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ERR738565.fastq.gz | FASTQ | 1.1 GB | — | — | c72ad0afe0543253859f5fd2197d720c | Download |
Instrument: Illumina HiSeq 2000 ·
Layout: SINGLE ·
Reads: 111370579 ·
Read length: — ·
Date: 2015-02-17
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ERR738561.fastq.gz | FASTQ | 8.1 GB | — | — | 57cbb8ee7abbce25ab2f2d8a36c19a73 | Download |
Instrument: Illumina HiSeq 2000 ·
Layout: SINGLE ·
Reads: 17460812 ·
Read length: — ·
Date: 2015-02-17
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ERR738566.fastq.gz | FASTQ | 1.3 GB | — | — | 728b221929a886ec74878242cb61ba60 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.