SAMEA10833668

EXTERNAL

Sample

Accession

SAMEA10833668

Alias

AMA005

Sex

Female

Center

MPI-EVA

Description

AMA005

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway B4a1a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
B4
chrM:15640T>C
B4-C16261T
chrM:15684C>T
B4a
chrM:4888T>C, chrM:8546G>A
B4a1
chrM:9661T>C
B4a1a
chrM:11662C>T, chrM:15169A>G, chrM:16138T>C, chrM:6142T>C
B4a1a1
chrM:13445A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: PAIRED · Reads: 16660198 · Read length: — · Date: 2022-05-18

File	Format	Size	Reference	Aligner	md5
ERR7559059_1.fastq.gz	FASTQ	231.0 MB	—	—	b0ccbc68a353d777cfb40b97bee6347d	Download
ERR7559059_2.fastq.gz	FASTQ	234.8 MB	—	—	a160071a36816f192446efa13419d360	Download

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 3638444 · Read length: — · Date: 2022-05-18

File	Format	Size	Reference	Aligner	md5
ERR7557788.fastq.gz	FASTQ	122.1 MB	—	—	c8f75a42a2fbaee7b86d3e5be6545cc6	Download

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 5149071 · Read length: — · Date: 2022-05-18

File	Format	Size	Reference	Aligner	md5
ERR7557789.fastq.gz	FASTQ	178.0 MB	—	—	a3a2b5503cd969318a2dbe0018443c9d	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.