SAMEA10833665

EXTERNAL

Sample

Accession

SAMEA10833665

Alias

AMA001

Sex

Male

Center

MPI-EVA

Description

AMA001

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway B4a1a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
B4
chrM:15640T>C
B4-C16261T
chrM:15684C>T
B4a
chrM:4888T>C, chrM:8546G>A
B4a1
chrM:9661T>C
B4a1a
chrM:11662C>T, chrM:15169A>G, chrM:16138T>C, chrM:6142T>C
B4a1a1
chrM:13445A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: PAIRED · Reads: 405502 · Read length: — · Date: 2022-05-18

File	Format	Size	Reference	Aligner	md5
ERR7559047_1.fastq.gz	FASTQ	5.8 MB	—	—	dbcdb7edaf3f1ea51eec80d9ef1a6fd9	Download
ERR7559047_2.fastq.gz	FASTQ	6.3 MB	—	—	847d57b332bb7385e9c81fca6df496f8	Download

Instrument: Illumina HiSeq 2500 · Layout: PAIRED · Reads: 10634148 · Read length: — · Date: 2022-05-18

File	Format	Size	Reference	Aligner	md5
ERR7559048_1.fastq.gz	FASTQ	187.6 MB	—	—	a8739fc9187d7dee019e526754f5b3da	Download
ERR7559048_2.fastq.gz	FASTQ	197.5 MB	—	—	1e269a989382c1105d373fb10ba57806	Download

Instrument: Illumina HiSeq 2500 · Layout: PAIRED · Reads: 52801954 · Read length: — · Date: 2022-05-18

File	Format	Size	Reference	Aligner	md5
ERR7559049_1.fastq.gz	FASTQ	732.4 MB	—	—	239b1507acdcbb71976718abde7c9a1b	Download
ERR7559049_2.fastq.gz	FASTQ	767.1 MB	—	—	95ca05e5aa830c65cfaca70ae0932ca6	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.