SAMEA104423058

EXTERNAL

Sample

Accession

SAMEA104423058

Alias

I1875

Sex

Female

Center

HARVARD MEDICAL SCHOOL

Description

WHG

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U5b2b

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U5
chrM:13040T>C, chrM:15693C>T
U5a'b
chrM:2620T>C, chrM:8900G>A
U5b
chrM:13605T>C, chrM:16142C>T, chrM:7191A>G
U5b2
chrM:1145C>T, chrM:13060A>G
U5b2b
chrM:11076A>G, chrM:12057A>G, chrM:13053A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 11493 · Read length: — · Date: 2018-02-19

File	Format	Size	Reference	Aligner	md5
I1875_MT.bam	BAM	412.2 KB	—	—	cbb9cf6ccef96fe501ecaa2ed1d35d6a	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1445837 · Read length: — · Date: 2018-02-19

File	Format	Size	Reference	Aligner	md5
I1875.bam	BAM	81.8 MB	—	—	8ac40df2aee7c3b5d4453c0b53dc367d	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.