SAMEA104422952

EXTERNAL

Sample

Accession

SAMEA104422952

Alias

I4438

Sex

Male

Center

HARVARD MEDICAL SCHOOL

Description

Latvia_HG

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U4b1a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U4'9
chrM:5422T>C
U4
chrM:10755C>T, chrM:14043C>T, chrM:15116T>C, chrM:15779T>C, chrM:16187T>C, chrM:4069T>C, chrM:5470A>G
U4b
chrM:7128T>C
U4b1
chrM:10762T>C
U4b1a
chrM:3095A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 130689 · Read length: — · Date: 2018-02-19

File	Format	Size	Reference	Aligner	md5
I4438_MT.bam	BAM	4.1 MB	—	—	39e5b99c59f5a8c0691640feda64d0be	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 11145601 · Read length: — · Date: 2018-02-19

File	Format	Size	Reference	Aligner	md5
I4438.bam	BAM	549.5 MB	—	—	7cbe31f116a60fe0e872dabda4f43e4f	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.