SAMEA104408001

EXTERNAL

Sample

Accession

SAMEA104408001

Alias

I2636

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Scotland_N

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway V

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
HV0
chrM:15721T>C, chrM:16064T>C
V
chrM:15327C>T, chrM:4003G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 19810357 · Read length: — · Date: 2018-02-16

File	Format	Size	Reference	Aligner	md5
I2636_1240k.bam	BAM	933.9 MB	—	—	1c41d10ad1e3f980ef75f4730d488c7c	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 41786 · Read length: — · Date: 2018-02-16

File	Format	Size	Reference	Aligner	md5
I2636_MT_Lib1.bam	BAM	1.2 MB	—	—	68a7043fcbe4895dbe9677633860edb0	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 183226 · Read length: — · Date: 2018-02-16

File	Format	Size	Reference	Aligner	md5
I2636_MT_Lib2.bam	BAM	5.5 MB	—	—	f6fceede3be1cf0f0bd2fcb6acfd4287	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.