SAMEA104407691

EXTERNAL

Sample

Accession

SAMEA104407691

Alias

I2455

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Beaker_Britain

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U5a2c3a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U5
chrM:13040T>C, chrM:15693C>T
U5a'b
chrM:2620T>C, chrM:8900G>A
U5a
chrM:14216A>G, chrM:15679C>T
U5a2
chrM:15949G>A
U5a2c3
chrM:10042C>T
U5a2c3a
chrM:10132A>C, chrM:10888T>C, chrM:1127C>T, chrM:14982A>G, chrM:6692G>A, chrM:7383A>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 817396 · Read length: — · Date: 2018-02-16

File	Format	Size	Reference	Aligner	md5
I2455_1240k.bam	BAM	38.8 MB	—	—	6560e124ed92dcc347c10cf0dfe56fc4	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 285936 · Read length: — · Date: 2018-02-16

File	Format	Size	Reference	Aligner	md5
I2455_MT_Lib2.bam	BAM	8.8 MB	—	—	6e2ac9deb2ef17a9093d07438edc5915	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 309616 · Read length: — · Date: 2018-02-16

File	Format	Size	Reference	Aligner	md5
I2455_MT_Lib1.bam	BAM	9.0 MB	—	—	a6a84a7269af5ed347e2621541f4b09a	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.