SAMEA104354419

EXTERNAL

Sample

Accession

SAMEA104354419

Alias

Vim2b

Sex

Male

Center

JOHANNES GUTENBERG UNIVERSITY MAINZ

Description

Capture and/or shotgun data from aDNA libraries

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H7

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H7
chrM:4216A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 24017403 · Read length: — · Date: 2018-03-11

File	Format	Size	Reference	Aligner	md5
Vim2b.full-hg19.bam	BAM	2.1 GB	—	—	172b839d260fa36e538568503c4ac4d1	Download

Instrument: Illumina MiSeq · Layout: SINGLE · Reads: 32620 · Read length: — · Date: 2018-03-11

File	Format	Size	Reference	Aligner	md5
Vim2b.MT-rCRS.bam	BAM	3.3 MB	—	—	dc77c03346b27c325613fb4744cd72ad	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.